| Barnet FC v MK Dons (Milton Keynes Dons) 30/09/2006 | View match | |
| Stockport County FC v Barnet FC 07/10/2006 | View match | |
| Barnet FC v Lincoln City FC 14/10/2006 | View match | |
| Darlington FC v Barnet FC 21/10/2006 | View match | |
| Barnet FC v Chester City FC 28/10/2006 | View match | |
| Hartlepool United v Barnet FC 04/11/2006 | View match | |
| Gainsborough Trinity v Barnet FC 11/11/2006 | View match | |
| Barnet FC v Rochdale FC 18/11/2006 | View match | |
| Bristol Rovers FC v Barnet FC 26/11/2006 | View match | |
| Barnet FC v Northampton Town FC 02/12/2006 | View match | |
| Barnet FC v Grimsby Town FC 05/12/2006 | View match | |
| Wycombe Wanderers FC v Barnet FC 09/12/2006 | View match |