| Grays Athletic v Southport 09/09/2006 | View match | |
| Southport v Crawley Town FC 16/09/2006 | View match | |
| Kidderminister Harriers v Southport 19/09/2006 | View match | |
| York City FC v Southport 23/09/2006 | View match | |
| Southport v Northwich Victoria 26/09/2006 | View match | |
| Southport v Exeter City FC 30/09/2006 | View match | |
| Oxford United FC v Southport 03/10/2006 | View match | |
| Southport v St Albans City 07/10/2006 | View match | |
| Southport v Stevenage Borough FC 10/10/2006 | View match | |
| Weymouth v Southport 14/10/2006 | View match | |
| Altrincham v Southport 21/10/2006 | View match | |
| Southport v Tamworth 04/11/2006 | View match |